Manitowoc Lutheran High School offers its students an interscholastic sports program with teams on the club, freshman, junior varsity, and varsity levels. MLHS is a member of the Olympian/Packerland Small Schools Conference for football, and the Olympian Conference for all other sports. We are also a member of the Wisconsin Interscholastic Athletic Association (WIAA).
| Boys' Sports | Girls' Sports |
| Baseball | Basketball |
| Basketball | Cheerleading |
| Cross Country | Cross Country |
| Football | Pom Squad |
| Track | Softball |
| Wrestling | Track |
| Volleyball | |
|
Soccer Club |
(co-ed) |
